DB Reader
Bases: FrozenModel
Allows you to read data from a table with specified database connection and parameters, and return its content as Spark dataframe. |support_hooks|
.. note::
DBReader can return different results depending on :ref:`strategy`
.. note::
This class operates with only one source at a time. It does NOT support executing queries
to multiple source, like ``SELECT ... JOIN``.
.. versionadded:: 0.1.0
.. versionchanged:: 0.8.0
Moved onetl.core.DBReader → onetl.db.DBReader
Parameters
connection : :obj:onetl.connection.BaseDBConnection
Class which contains DB connection properties. See :ref:db-connections section
str
Table/collection/etc name to read data from.
If connection has schema support, you need to specify the full name of the source
including the schema, e.g. schema.name.
.. versionchanged:: 0.7.0
Renamed table → source
list of str, default: None
The list of columns to be read.
If RDBMS supports any kind of expressions, you can pass them too.
.. code:: python
columns = [
"mycolumn",
"another_column as alias",
"count(*) over ()",
"some(function) as alias2",
]
.. note::
Some sources does not have columns.
.. note::
It is recommended to pass column names explicitly to avoid selecting too many columns,
and to avoid adding unexpected columns to dataframe if source DDL is changed.
.. deprecated:: 0.10.0
Syntax ``DBReader(columns="col1, col2")`` (string instead of list) is not supported,
and will be removed in v1.0.0
Any, default: None
Custom where for SQL query or MongoDB pipeline.
where syntax depends on the source. For example, SQL sources
accept where as a string, but MongoDB sources accept where as a dictionary.
.. code:: python
# SQL database connection
where = "column_1 > 2"
# MongoDB connection
where = {
"col_1": {"$gt": 1, "$lt": 100},
"col_2": {"$gt": 2},
"col_3": {"$eq": "hello"},
}
.. note::
Some sources does not support data filtering.
type[HWM] | None, default: None
HWM class to be used as :etl-entities:HWM <hwm/index.html> value.
.. code:: python
hwm = DBReader.AutoDetectHWM(
name="some_unique_hwm_name",
expression="hwm_column",
)
HWM value will be fetched using hwm_column SQL query.
If you want to use some SQL expression as HWM value, you can use it as well:
.. code:: python
hwm = DBReader.AutoDetectHWM(
name="some_unique_hwm_name",
expression="cast(hwm_column_orig as date)",
)
.. note::
Some sources does not support passing expressions and can be used only with column/field
names which present in the source.
.. versionchanged:: 0.10.0
Replaces deprecated hwm_column and hwm_expression attributes
Any, default: None
Hint expression used for querying the data.
hint syntax depends on the source. For example, SQL sources
accept hint as a string, but MongoDB sources accept hint as a dictionary.
.. code:: python
# SQL database connection
hint = "index(myschema.mytable mycolumn)"
# MongoDB connection
hint = {
"mycolumn": 1,
}
.. note::
Some sources does not support hints.
StructType, optional, default: None
Spark DataFrame schema, used for proper type casting of the rows.
.. code:: python
from pyspark.sql.types import (
DoubleType,
IntegerType,
StringType,
StructField,
StructType,
TimestampType,
)
df_schema = StructType(
[
StructField("_id", IntegerType()),
StructField("text_string", StringType()),
StructField("hwm_int", IntegerType()),
StructField("hwm_datetime", TimestampType()),
StructField("float_value", DoubleType()),
],
)
reader = DBReader(
connection=connection,
source="fiddle.dummy",
df_schema=df_schema,
)
.. note::
Some sources does not support passing dataframe schema.
Examples
.. tabs::
.. code-tab:: py Minimal example
from onetl.db import DBReader
from onetl.connection import Postgres
postgres = Postgres(...)
# create reader
reader = DBReader(connection=postgres, source="fiddle.dummy")
# read data from table "fiddle.dummy"
df = reader.run()
.. code-tab:: py With custom reading options
from onetl.connection import Postgres
from onetl.db import DBReader
postgres = Postgres(...)
options = Postgres.ReadOptions(sessionInitStatement="select 300", fetchsize="100")
# create reader and pass some options to the underlying connection object
reader = DBReader(connection=postgres, source="fiddle.dummy", options=options)
# read data from table "fiddle.dummy"
df = reader.run()
.. code-tab:: py Full example
from onetl.db import DBReader
from onetl.connection import Postgres
postgres = Postgres(...)
options = Postgres.ReadOptions(sessionInitStatement="select 300", fetchsize="100")
# create reader with specific columns, rows filter
reader = DBReader(
connection=postgres,
source="default.test",
where="d_id > 100",
hint="NOWAIT",
columns=["d_id", "d_name", "d_age"],
options=options,
)
# read data from table "fiddle.dummy"
df = reader.run()
.. tab:: Incremental reading
See :ref:`strategy` for more examples
.. code:: python
from onetl.strategy import IncrementalStrategy
...
reader = DBReader(
connection=postgres,
source="fiddle.dummy",
hwm=DBReader.AutoDetectHWM( # mandatory for IncrementalStrategy
name="some_unique_hwm_name",
expression="d_age",
),
)
# read data from table "fiddle.dummy"
# but only with new rows (`WHERE d_age > previous_hwm_value`)
with IncrementalStrategy():
df = reader.run()
Source code in onetl/db/db_reader/db_reader.py
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run()
Reads data from source table and saves as Spark dataframe. |support_hooks|
.. note::
This method can return different results depending on :ref:`strategy`
.. warning::
If :etl-entities:`hwm <hwm/index.html>` is used, then method should be called inside :ref:`strategy` context. And vise-versa, if HWM is not used, this method should not be called within strategy.
.. versionadded:: 0.1.0
Returns
df : pyspark.sql.dataframe.DataFrame Spark dataframe
Examples
Read data to Spark dataframe:
.. code:: python
df = reader.run()
Source code in onetl/db/db_reader/db_reader.py
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has_data()
Returns True if there is some data in the source, False otherwise. |support_hooks|
.. note::
This method can return different results depending on :ref:`strategy`
.. warning::
If :etl-entities:`hwm <hwm/index.html>` is used, then method should be called inside :ref:`strategy` context. And vise-versa, if HWM is not used, this method should not be called within strategy.
.. versionadded:: 0.10.0
Raises
RuntimeError Current strategy is not compatible with HWM parameter.
Examples
.. code:: python
reader = DBReader(...)
# handle situation when there is no data in the source
if reader.has_data():
df = reader.run()
else:
# implement your handling logic here
...
Source code in onetl/db/db_reader/db_reader.py
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raise_if_no_data()
Raises exception NoDataError if source does not contain any data. |support_hooks|
.. note::
This method can return different results depending on :ref:`strategy`
.. warning::
If :etl-entities:`hwm <hwm/index.html>` is used, then method should be called inside :ref:`strategy` context. And vise-versa, if HWM is not used, this method should not be called within strategy.
.. versionadded:: 0.10.0
Raises
RuntimeError Current strategy is not compatible with HWM parameter.
:obj:onetl.exception.NoDataError
There is no data in source.
Examples
.. code:: python
reader = DBReader(...)
# ensure that there is some data in the source before reading it using Spark
reader.raise_if_no_data()
Source code in onetl/db/db_reader/db_reader.py
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